Open source
Paralome
A reproducible, checkpointed workflow framework for omics analysis on HPC — one backbone under independent RNA, ATAC and variant pipelines.
Read about Paralome →ipaapi
Submit datasets to QIAGEN Ingenuity Pathway Analysis from the command line — one file or several hundred. Validates every value against IPA’s undocumented rules before upload, so a batch fails loudly instead of quietly producing an analysis built on a fraction of the data.
Read about ipaapi →